G.D. Ozhegov, A.S. Pavlova, D.E. Zhuravleva, N.E. Gogoleva, E.I. Shagimardanova, M.I. Markelova, D.R. Yarullina, A.R. Kayumov
Whole genome sequence data of Lactobacillus fermentum HFD1, the producer of antibacterial peptidesData in Brief. – 2020. – V. 32. – 106105.
Ziganshina E.E., Sagitov I.I., Akhmetova R.F., Saleeva G.T., Kiassov A.P., Gogoleva N.E., Shagimardanova E.I., Ziganshin A.M.
Ziganshina E.E. Comparison of the microbiota and inorganic anion content in the saliva of patients with gastroesophageal reflux disease and gastroesophageal reflux disease-free individualsBioMed Research International. - 2020. - Vol. 2020 - Art. № 2681791.
Kuznetsov MS, Lisukov AN, Rizvanov AA, Gusev OA et al.
Bioinformatic Study of Transcriptome Changes in the Mice Lumbar Spinal Cord After the 30-Day Spaceflight and Subsequent 7-Day Readaptation on Earth: New Insights Into Molecular Mechanisms of the Hypogravity Motor Syndrome.
Front Pharmacol. 2019;10:747. Published 2019 Jul 11. doi:10.3389/fphar.2019.00747
Ryabova, A.; Kozlova, O.; Kadirov, A.; Ananeva, A.; Gusev, O.; Shagimardanova, E.
DetR DB: A Database of Ionizing Radiation Resistance Determinants.Genes 2020, 11, 1477.
Nikitin AG, Chudakova DA, Enikeev RF, Gusev OA, Shagimardanova EI, Shigapova LH et al.
Lynch Syndrome Germline Mutations in Breast Cancer: Next Generation Sequencing Case-Control Study of 1,263 Participants.Front Oncol. 2020;10:666. Published 2020 May 29. doi:10.3389/fonc.2020.00666
Avetisov SE, Abramova ND, Gogoleva NE, Gusev OA et al.
Ratsional'naya strategiya izucheniya mikrobioma glaznoi poverkhnosti pol'zovatelei zhestkikh kontaktnykh linz metodom metabarkodinga po genu 16S rRNK [Rational strategy for studying microbiome of the ocular surface of people using hard contact lenses by method of 16S rRNA gene metabarcoding].Vestn Oftalmol. 2020;136(3):3-9. doi:10.17116/oftalma20201360313
Adameyko KI, Kravchuk OI, Finoshin AD, Gusev OA et al.
Structure of Neuroglobin from Cold-Water Sponge Halisarca dujardinii.Mol Biol (Mosk). 2020;54(3):474-479. doi:10.31857/S0026898420030039
Finoshin AD, Adameyko KI, Mikhailov KV, Gusev OA, Shagimardanova EI et al.
Correction: Iron metabolic pathways in the processes of sponge plasticity.PLoS One. 2020;15(3):e0230634. Published 2020 Mar 12. doi:10.1371/journal.pone.0230634
Finoshin AD, Adameyko KI, Mikhailov KV, Gusev OA, Shagimardanova EI et al.
Iron metabolic pathways in the processes of sponge plasticity [published correction appears in PLoS One.
2020 Mar 12;15(3):e0230634]. PLoS One. 2020;15(2):e0228722. Published 2020 Feb 21. doi:10.1371/journal.pone.0228722
Yamada TG, Hiki Y, Hiroi NF, Gusev OA, Shagimardanova EI et al.
Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11. PLoS One. 2020;15(3):e0230218. Published 2020 Mar 19. doi:10.1371/journal.pone.0230218
Makhnovskii PA, Zgoda VG, Bokov RO, Gusev OA, Shagimardanova EI, Gazizova GR et al.
Regulation of Proteins in Human Skeletal Muscle: The Role of Transcription.
Sci Rep. 2020;10(1):3514. Published 2020 Feb 26. doi:10.1038/s41598-020-60578-2
Ziganshina EE, Sagitov II, Akhmetova RF, Shagimardanova EI, Gogoleva NE et al.
Comparison of the Microbiota and Inorganic Anion Content in the Saliva of Patients with Gastroesophageal Reflux Disease and Gastroesophageal Reflux Disease-Free Individuals.
Biomed Res Int. 2020;2020:2681791. Published 2020 May 13. doi:10.1155/2020/2681791
Putlyaeva LV, Demin DE, Uvarova AN, Shagimardanova EI, Gazizova GR et al.
PTPN11 Knockdown Prevents Changes in the Expression of Genes Controlling Cell Cycle, Chemotherapy Resistance, and Oncogene-Induced Senescence in Human Thyroid Cells Overexpressing BRAF V600E Oncogenic Protein.Biochemistry (Mosc). 2020;85(1):108-118. doi:10.1134/S0006297920010101
Gogoleva NE, Konnova TA, Balkin AS, Plotnikov AO, Gogolev YV.
Transcriptomic data of Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S treated with novobiocin.Data Brief. 2020;29:105297. Published 2020 Feb 17. doi:10.1016/j.dib.2020.105297
Gogoleva NE, Konnova TA, Ismailov TT, Balkin AS, Belimov AA, Gogolev YV.
Dataset for transcriptome analysis of abscisic acid degrading bacterium Novosphingobium sp. P6W. Data Brief. 2019;28:105001. Published 2019 Dec 16. doi:10.1016/j.dib.2019.105001
Sinkov VV, Ogarkov OB, Plotnikov AO, Gogoleva NE, et al.
Metagenomic analysis of mycobacterial transrenal DNA in patients with HIV and tuberculosis coinfection. Infect Genet Evol. 2020;77:104057. doi:10.1016/j.meegid.2019.104057
Smirnov D, Pikunov A, Syunyaev R, Deviatiiarov R, Gusev O, et al. (2020)
Genetic algorithm-based personalized models of human cardiac action potential. PLOS ONE 15(5): e0231695. doi.org/10.1371/journal.pone.0231695
Deviatiiarov, Ruslan, Rustam Ayupov, Alexander Laikov, Elena Shagimardanova, Takahiro Kikawada, and Oleg Gusev. 2020.
"
Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge." Insects.
https://doi.org/10.3390/insects11090634 Tokumoto, Shoko, Yugo Miyata, Kengo Usui, Ruslan Deviatiialov, Takahiro Ohkawa, Sabina Kondratieva, Elena Shagimardanova, Oleg Gusev, Richard Cornette, Masayoshi Itoh, Yoshihide Hayashizaki, and Takahiro Kikawada 2020.
Development of a Tet-On inducible expression system for the anhydrobiotic cell line, Pv11Insects.
https://doi.org/10.3390/insects11110781.
Voronina, T. A., Nesmelov, A. A., Kondratyeva, S. A., Deviatiiarov, R. M., Miyata, Y., Tokumoto, S., … Shagimardanova, E. I. (2020).
New group of transmembrane proteins associated with desiccation tolerance in the anhydrobiotic midge Polypedilum vanderplanki.Scientific Reports, 10(1), 1–13.
https://doi.org/10.1038/s41598-020-68330-6 Zlotina A, Melnik O, Fomicheva Y, Skitchenko R, Sergushichev A, Shagimardanova E, Gusev O, Gazizova G, Loevets T,
Vershinina T, Kozyrev I, Gordeev M, Vasichkina E, Pervunina T, Kostareva A. A
300-kb microduplication of 7q36.3 in a patient with triphalangeal thumb-polysyndactyly syndrome combined with congenital heart disease and optic disc coloboma: a case report.BMC Med Genomics. 2020 Nov 20;13(1):175. doi: 10.1186/s12920-020-00821-x. PMID: 33218365; PMCID: PMC7678048.
Efremova, L.N.; Strelnikova, S.R.; Gazizova, G.R.; Minkina, E.A.; Komakhin, R.A.
A Synthetic Strong and Constitutive Promoter Derived from the Stellaria media pro-SmAMP1 and pro-SmAMP2 Promoters for Effective Transgene Expression in Plants.Genes 2020, 11, 1407.
Sergei, B., Pavel, D., Aigul, G., Firyuza, B., Ilmira, N., Ilshat, M., Aida, A., Refat, K., Natalia, A., Elena, S., & Vera, G. (2020).
Inhibition of FGFR2-Signaling Attenuates a Homology-Mediated DNA Repair in GIST and Sensitizes Them to DNA-Topoisomerase II Inhibitors.International journal of molecular sciences, 21(1), 352.
https://doi.org/10.3390/ijms21010352 Ryabova A, Cornette R, Cherkasov A, Watanabe M, Okuda T, Shagimardanova E, Kikawada T, Gusev O.
Combined metabolome and transcriptome analysis reveals key components of complete desiccation tolerance in an anhydrobiotic insect.Proc Natl Acad Sci U S A. 2020 Aug 11;117(32):19209-19220. doi: 10.1073/pnas.2003650117. Epub 2020 Jul 28. PMID: 32723826; PMCID: PMC7431039.
Ananeva A., Leksina Y., Andryushkina A., Shagimardanova E
Characterization of the new HLA allele HLA-A*25:68 by next-generation sequencing.HLA. - 2020. - V.96, Is.5, -.P 627-628
Ananeva A.
A novel HLA‐B allele, HLA‐B*44:493, detected in a potential hematopoietic stem cell donor // Ananeva A., Sergeeva I., Andryushkina A., Shagimardanova E. HLA. - 2020. - V.96, Is.6, -.P 730-732
Ananeva A.
The novel allele HLA-A*11:362 identified in two unrelated bone marrow donors from Russia // Ananeva A., Sergeeva I., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Identification of the novel HLA‐DQB1, allele DQB1*06:02:44 by next‐generation sequencing// Ananeva A., Osipova N., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Detection of the HLA‐B*51:322 allele in a Russian individual // Ananeva A., Osipova N., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
The novel HLA‐A*02:941 allele was identified during high‐resolution HLA typing // Ananeva A., Leksina Y., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Characterization of the new HLA‐B*35:482, detected in a potential hematopoietic stem cell donor // Ananeva A., Sergeeva I., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Identification of three new HLA‐DQB1 alleles: HLA‐DQB1*03:02:33, ‐DQB1*04:79 and ‐DQB1*05:249// Ananeva A., Osipova N., Shaihutdinova A., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Characterization of three new HLA‐A*11 alleles in Russian individuals by next generation sequencing // Ananeva A., Leksina Y., Sergeeva I., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
HLA‐A*02:934, identified in National bone marrow donor registry named after Vasya Perevoshchikov, Russian Federation // Ananeva A., Shaihutdinova A., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Ananeva A.
Two novel HLA‐B variants identified in Russian individuals, HLA‐B*56:74 and ‐B*58:124 // Ananeva A., Leksina Y., Andryushkina A., Shagimardanova E. HLA. - 2020. In press
Tokumoto S.
Development of a Tet-On Inducible Expression System for the Anhydrobiotic Cell Line, Pv11 // Tokumoto S, Miyata Y., Usui K., Deviatiiarov R.,Ohkawa T.,Kondratieva S.,Shagimardanova E., Gusev O., Cornette R.,Itoh M., Hayashizaki Y., Kikawada T. Insects 2020, 11(11), 781
Larskaya I. Stimulation of adventitious root formation by the oligosaccharin OSRG at the transcriptome level // Larskaya I., Gorshkov O., Mokshina N., Trofimova O., Mikshina P., Klepikova A., Gogoleva N., Gorshkova T. Plant Signal Behav. 2020;15(1):1703503.
Gabbasova, E.L. Hereditary sensory motor polyneuropathy // E.L.Gabbasova, A.E. Komissarov, O.E. Agranovich, M.V. Savina, E.A. Kochenova, S.I. Trofimova, A.D. Slobodina, E. Shagimardanova, L. Shigapova, S.V. Sarantceva. Pediatric Traumatology, Orthopaedics and Reconstructive Surgery. -2020. -V.8. -I.3. -P.333-342
Microbiota composition data of imago and larval stage of the anhydrobiotic midge // N. Shaikhutdinov, N. Gogoleva, O. Gusev, E. Shagimardanova. Data in Brief. -V. 33. December 2020, 106527
Ryabova, A.; Kozlova, O.; Kadirov, A.; Ananeva, A.; Gusev, O.; Shagimardanova, E. DetR DB: A Database of Ionizing Radiation Resistance Determinants. Genes 2020, 11, 1477.
Ozhegov, G.D. Whole genome sequence data of Lactobacillus fermentum HFD1, the producer of antibacterial peptides / G.D. Ozhegov, A.S. Pavlova, D.E. Zhuravleva, N.E. Gogoleva, E.I. Shagimardanova, M.I. Markelova, D.R. Yarullina, A.R. Kayumov // Data in Brief. – 2020. – V. 32. – 106105.
Zhuravleva D. E. Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN / D.E. Zhuravleva , Z.I. Iskhakova, G.D. Ozhegov, N.E. Gogoleva, D.R. Khusnutdinova, E.I. Shagimardanova, K. Forchhammer, A.R. Kayumov //Current Microbiology. – 2020. – Vol. 77. – №. 11. – P. 3538-3545.
Khilyas I. V. Genomic and phenotypic analysis of siderophore-producing Rhodococcus qingshengii strain S10 isolated from an arid weathered serpentine rock environment / I.V. Khilyas, A.V. Sorokina, M.I. Markelova, M. Belenikin, L. Shafigullina, R.I. Tukhbatova, E.I. Shagimardanova, J. Blom, M.R. Sharipova & M.F. Cohen // Archives of Microbiology. – 2020. – P. 1-6.